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Monday | July 23th, 2018 |
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BUILDING C3
RECEPTION
08:15
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Registration |
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BUILDING C3
MAIN AUDITORIUM
09:00 – 09:45
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Opening Session |
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BUILDING C3
MAIN AUDITORIUM
Chair: Carlos A. Braumann
09:50 – 10:10
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Odo Diekmann | Utrecht University, The Netherlands
TRIBUTE TO KARL PETER HADELER
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BUILDING C3
MAIN AUDITORIUM
Chair: José A. Carrillo
10:10 – 11:10
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Samuel Kou | Harvard University, USA
(BS-EMS Joint Lecture)
BIG DATA, GOOGLE AND DISEASE DETECTION:
A STATISTICAL ADVENTURE
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BUILDING C3
11:10 – 11:40
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Coffee Break |
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BUILDING C8
11:40 – 13:00
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Mini-Symposia and Parallel Sessions |
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ROOM C8.2.02
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Mini-symposium “A Multiscale approach to `Growth and Form'”
(Organizers: Chandrasekhar Venkataraman and Mariya Ptashnyk)
11:40-12:00 John King “Multiphase approaches to tissue growth”
12:00-12:20 Harsha Hutridurga “Evolution by competition-diffusion in heterogeneous environments”
12:20-12:40 Dagmar Iber “How to shape an Organ? Computational models of organogenesis”
12:40-13:00 Fred Vermolen “Cell-based and continuum scale models for the contraction of burns”
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| ROOM C8.2.03 |
Mini-symposium “Hybrid modelling in biology”
(Organizers: Francesco Giannino and Christian E. Vincenot)
11:40-12:00 Francesco Giannino “Vegetation pattern formation: system dynamics, individual-based
hybrid modelling exercises”
12:00-12:20 Gudrun Wallentin “Dynamic coupling of Individual-based with system-dynamics models to
represent multi-scale systems”
12:20-12:40 Constantinos Siettos “Bridging scales: from the atomistic simulations to the systematic
numerical analysis of the emergent behaviour”
12:40-13:00 Dimitrios Gkousis “Valid reduced Michaelis-Menten models”
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| ROOM C8.2.06 |
Mini-symposium “Mathematical neuroscience”
(Organizers: Daniele Avitabile and Reuben O’Dea)
11:40-12:00 Susanne Ditlevsen “Inferring visual processing in the brain”
12:00-12:20 KrasimiraTsaneva-Atanasova “Individual motor signatures and socio-motor biomarkers in
schizophrenia”
12:20-12:40 Elif Köksal Ersöz “Canard mediated mixed-mode bursting oscillations in a rate model”
12:40-13:00 Michael Forrester “TMS-induced synchronisation in human brain networks”
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| ROOM C8.2.10 |
Mini-symposium “Dynamics and oscillations of reaction networks”
(Organizer: Josef Hofbauer)
11:40-12:00 Josef Hofbauer “Dynamics of generalized mass-action systems”
12:00-12:20 Alan D. Rendall “Bounded and unbounded oscillations in the Selkov model of glycolysis”
12:20-12:40 Anne Shiu “Multisite phosphorylation systems: bistability, oscillations, and a rational
parametrization of steady states”
12:40-13:00 Maya Mincheva “Parametric sensitivity analysis of a gene regulation delay model”
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| ROOM C8.2.11 |
Mini-symposium “Topics in structured population dynamics”
(Organizers: Sílvia Cuadrado and Jordi Ripoll)
11:40-12:00 Carles Barril “From individuals to populations: densities versus histories”
12:00-12:20 Raluca Eftimie “A kinetic modelling approach for tumour-macrophages interactions in
heterogeneous cell populations”
12:20-12:40 Jordi Ripoll “Limit procedure for the computation of R0 in structured population models”
12:40-13:00 Laurent Pujo-Menjouet “Language competition: analysis and qualitative simulations of a
deterministic age-structured mathematical model”
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| ROOM C8.2.13 |
Mini-symposium “Quantifying genetic and non-genetic heterogeneity in cancer evolution"
(Organizers: Ryan Schenk and Mohit Kumar Jolly)
11:40-12:00 Benjamin Werner “Measuring single cell divisions in human cancers from multi-region
sequencing data”
12:00-12:20 Mingyang Lu “Understanding the robustness and plasticity of gene regulatory circuits”
12:20-12:40 Gregory Kimmel “Dynamics of non-Hodgkin lymphoma CAR-T cell therapy”
12:40-13:00 Lorand Gabriel Parajdi “Mathematical modeling of cell dynamics and optimization
problems in chronic myeloid leukemia therapy”
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| ROOM C8.2.15 |
Parallel Session “Cancer I”
11:40-12:00 Martina Conte “Kinetic-based models for tumor-immune system competition”
12:00-12:20 Agnieszka Bartłomiejczyk “Travelling waves in modelling chemotherapy for low grade
gliomas”
12:20-12:40 Stefano Avanzini “Probabilistic models of cancer: an estimate for the time to relapse”
12:40-13:00 Qi Ma “Genome wide study of glucocorticoid receptors’ role in estrogen receptors
regulated enhancers in breast cancer”
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| ROOM C8.2.17 |
Parallel Session “Evolutionary Dynamics I”
11:40-12:00 David Cheek “Mutation frequencies in a birth-death branching process”
12:200-12:20 George W. A. Constable “The effect of adult sex ratio on transitions between male and
female heterogamety”
12:20-12:40 Omri Tal “Bet hedging models: a reappraisal”
12:40-13:00 Alexandre Blanckaert “In search of the Goldilocks zone for hybrid speciation”
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| ROOM C8.2.19 |
Parallel Session “Mathematical Methods in Biology I”
11:40-12:00 Paulo Amorim “Reaction-diffusion and individual-based models for ant movement”
12:00-12:20 Timothy Whiteley “An integro-differential equation model for urban population dynamics
predicting emergent pattern formation”
12:20-12:40 Kenta Ishimoto “Hydrodynamic modelling of human sperm clustering”
12:40-13:00 Masakazu Akiyama “A mathematical model of collective cell migrations based on cell
polarity”
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| ROOM C8.2.23 |
Parallel Session “Physiology I”
11:40-12:00 Valeriia Kaneva “Particle-based model of microvascular thrombus formation demonstrates
the role of the interplay between platelet adhesive receptors”
12:00-12:20 Christopher D. Marcotte “Tuning critical excitations in stiff cardiac models”
12:20-12:40 Aleksey V. Belyaev “Computer simulations of cell adhesion to surfaces with microrelief”
12:40-13:00 Hisao Honda “Appearance of a chiral structure in cardiac looping of the embryonic heart”
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| ROOM C8.2.38 |
Parallel Session "Mathematical Methods in Biology II"
11:40-12:00 Katharina Franziska Becker “Modelling hierarchical pattern formation in epidermal
appendage development”
12:00-12:20 Thomas E. Woolley “Pattern production through a chiral chasing mechanism”
12:20-12:40 Sungrim Seirin-Lee “Pattern formation induced by dynamic deformation of domain”
12:40-13:00 Ricardo Martinez-Garcia “Cell adhesion and fluid flow jointly initiate biofilm spatial
structure”
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| ROOM C8.2.39 |
Parallel Session “Epidemiology I”
11:40-12:00 Gisele H. B. Miranda “Towards the prediction of influenza-like illness cases in Belgium”
12:00- 12:20 Edward Hill “Assessing intervention responses against H5N1 avian influenza outbreaks in
Bangladesh”
12:20-12:40 David Haw “Should we expect attack rates for infectious disease to vary across small spatial
scales?”
12:40-13:00 Silvério Rosa “Optimal control of a fractional epidemic model with application to HRSV
disease"
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BUILDING C3
“grab and go”
13:00 – 14:20
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Lunch Break |
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BUILDING C8
14:20 – 16:00
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Mini-Symposia and Parallel Sessions |
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| ROOM C8.2.02 |
Mini-symposium “Cross-talk between cells and extracellular matrix
in plant and animal development”
(Organizer: Eva Deinum)
14:20-14:40 Eva Deinum “On growth and form in plants and animals: crosstalk between cytoskeleton
and extracellular matrix”
14:40-15:00 Julio Belmonte “A theory that predicts behaviors of disordered cytoskeletal networks”
15:00-15:20 Adam Runions “Why plants make puzzle-shaped cells”
15:20-15:40 Louis Daniel Weise “Mechanical model to study plant development”
15:40-16:00 Diego A. Vargas “Discrete element model of the cell to explore how HUVECs respond to
mechanical properties of the substrate”
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| ROOM C8.2.03 |
Mini-symposium “Reduction and structure of reaction networks”
(Organizer: Carsten Wiuf)
14:20-14:40 Carsten Wiuf “Model reduction and the QSSA”
14:40-15:00 Murad Banaji “Inheritance of oscillation in chemical reaction networks”
15:00-15:20 Casian Pantea “Bistability in mass action: inheritance from small subnetworks”
15:20-15:40 AmirHosein Sadeghimanesh “Intermediates, binomiality and multistationarity”
15:40-16:00 János Tóth “Further inverse problems”
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| ROOM C8.2.06 |
Mini-symposium “Plant models (A): plant development”
(Organizers: Mariya Ptashnyk and Lionel Dupuy)
14:20-14:40 Leah R Band “Modelling auxin dynamics in the plant root: cell-based and continuum
approaches”
14:40-15:00 Arezki Boudaoud “Understanding the robustness of morphogenesis using stochastic
mechanical models of organ growth”
15:00-15:20 George Bassel “The interplay between global and local rules regulates multicellular
morphogenesis”
15:20-15:40 Yann Guédon “Identifying developmental patterns in plant phenotyping data”
15:40-16:00 Henry Allen “Mathematical modelling and analysis of the interplay between auxin and
brassinosteroid in plant tissues”
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| ROOM C8.2.10 |
Mini-symposium “Multi-scale mathematical models in endocrinology”
(Organizers: Margaritis Voliotis and Eder Zavala)
14:20-14:40 David Rand “Stochastic transcriptional dynamics and spatial signalling for the prolactin
gene in single cells and tissue”
14:40-15:00 Frédérique Clément “Middle-out multi-scale modelling of the development of ovarian
follicles”
15:00-15:20 Eder Zavala “Developing a multiscale mathematical understanding of the HPA axis”
15:20-15:40 Duncan J. MacGregor “Population-based signal processing and stimulus-response in
oxytocin neurones”
15:40-16:00 Benoit Huard “Multiple scale analysis and periodic solutions in a model of ultradian
glucose regulation”
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| ROOM C8.2.11 |
Parallel Session “Ecology I"
14:20-14:40 Aisling J. Daly “An individual-based model of coexistence and competition between
cryptic nematode species”
14:40-15:00 Anna Poskrobko “On mathematical model for fission-fusion bats population”
15:00-15:20 Danish Ali Ahmed “Analysing the impact of trap geometry on pitfall trap counts”
15:20-15:40 Dmitrii O. Logofet “Averaging the population projection matrices overestimates the
stochastic growth rate”
15:40-16:00 Andrew Dean “Toxin-mediated competition in bacterial communities”
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| ROOM C8.2.13 |
Parallel Session “Cell and Intra-Cell Dynamics I"
14:20-14:40 Nikolaos Sfakianakis “The FBLM-FEM: from cell-cell adhesion to the cluster of cells and
cell monolayers”
14:40-15:00 Mauricio Moreira-Soares “Modelling cell shape and migration: a phase-field approach”
15:00-15:20 Alexander Leonard “The evolution of symmetric and asymmetric protein binding interfaces”
15:20-15:40 Haru Negami “Topological analysis of penicillin-binding proteins”
15:40-16:00 Anastasia A. Anashkina “Scoring, analysis and ranking of protein-protein docking models
by QASDOM server on the example of nef-calnexin interaction”
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| ROOM C8.2.15 |
Parallel Session “Population Biology I"
14:20-14:40 Atheeta Ching “The carrying simplex in non-competitive Lotka-Volterra systems”
14:40-15:00 Cecilia Berardo “Analysis of a functional response with prey-density dependent handling
time under an evolutionary perspective”
15:00-15:20 John R. Ellis “Formation of population clusters in density dependent random walks”
15:20-15:40 Nurdan Cabukoglu “Reaction-diffusion models for populations with kinesis”
15:40-16:00 Peter Jagers “How might a population have started?”
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| ROOM C8.2.17 |
Parallel Session “Physiology II"
14:20-14:40 Anahita Bayani “Modelling anti-inflammatory systems – spatial considerations in the
resolution of inflammation”
14:40-15:00 Eleni Moraki “Modelling corneal epithelium maintenance and recovery”
15:00-15:20 Johanne Gudmand-Hoeyer “The influence of transport proteins and competing steroids on
the plasma cortisol dynamics”
15:20-15:40 Mariia Dvoriashyna “Mathematical model of fluid and CO2 transport across the retinal
pigment epithelium”
15:40-16:00 Zuzanna Szymańska “Mathematical modelling of the tendon healing process: blow-ups
mean healing”
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| ROOM C8.2.19 |
Parallel Session “Immunology I"
14:20-14:40 Akane Hara “Theoretical study of interaction between allergy and intestinal microbiome”
14:40-15:00 Arran Hodgkinson “Both high and low affinity interferons necessary for effective immune
response: a mathematical modelling approach”
15:00-15:20 Sophie Ip “Kinetics of innate immunity within the cell: mathematical parallels with prions”
15:20-15:40 Sahamoddin Khailaie “Characterization of CTLA4 trafficking: a combined in silico and in
vitro approach”
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| ROOM C8.2.23 |
Parallel Session “Genetics and Genomics I"
14:20-14:40 Andre S. Ribeiro “Stochastic modeling and inference of temperature-dependent
transcription supercoiling dynamics”
14:40-15:00 Monika Kurpas “A simulation study of the relationship between DNA damage detection
pathways and the cell cycle”
15:00-15:20 Jonathan Harrison “Experimental verification of a coarse-grained model predicts
production rate limits mRNA localization”
15:20-15:40 Eva Stadler “Eigensolutions for a model of vertical gene transfer of plasmids”
15:40-16:00 Alexey V. Doroshkov “Molecular evolution and meta-transcriptomic approaches to access
the plant oxidative stress resistance enzymes”
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| ROOM C8.2.38 |
Parallel Session “Evolutionary Dynamics II"
14:20-14:40 Mario E. Veruete “Evolutionary branching via replicator-mutator equations”
14:40-15:00 Pietro Landi “Variability in life-history switch points across and within populations explained
by adaptive dynamics”
15:00-15:20 Frédéric M. Hamelin “Gene-for-gene epidemic models, systemic acquired resistance, and
the evolution of plant parasites”
15:20-15:40 Coralie Fritsch “Food web models with evolution of two traits”
15:40-16:00 Kalle Parvinen “The effect of spatial heterogeneity on evolution in spatial models”
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| ROOM C8.2.39 |
Parallel Session “Mathematical Methods in Biology III”
14:20-14:40 Simon Syga “A new lattice-gas cellular automaton model for cell aggregation”
14:40-15:00 Alexander Tam “The effect of nutrient-limited growth on floral pattern formation in yeast
biofilms”
15:00-15:20 Ulrich Dobramysl “Determining the probability flux from a Brownian source to small
absorbing windows via a mixed analytical-stochastic simulation method”
15:20-15:40 Clemens Kreutz “An intuitive and efficient approach for testing parameter identifiability”
15:40-16:00 Jean-Luc Gouze "Reduction of metabolic networks keeping core dynamics"
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BUILDING C3
MAIN AUDITORIUM
Chair: Nico Stollenwerk
16:10 – 17:10
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Eva Löcherbach | Université de Cergy-Pontoise, France
MODELING INTERACTING NETWORKS OF NEURONS AS
PROCESSES WITH VARIABLE LENGTH
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BUILDING C3
ATRIUM
17:20 – 18:50
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Poster Session I | Coffee Break + Cocktail
List of Posters HERE
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